Reading Data to Table

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Harry Green
Harry Green on 11 Oct 2018
Commented: Harry Green on 11 Oct 2018
I'm trying to read a text file into MATLAB into table format. I'm using MATLAB 2017a.
When I right click the file on the current folder tab and click import data, it knows exactly what to do. It takes the header row of the text file and uses them for the names of the MATLAB table columns, identifies variable types, etc. I'd like to know the command equivalent. I'm aware that it is possible to generate a script from the GUI, but the generated script has hardcoded column numbers, and the column order is likely to change due to circumstances out of my hands. readtable does not work, as the extension of the file isn't supported for some reason (it's just a plain text file so I don't understand the extension limitations on readtable).
  2 Comments
madhan ravi
madhan ravi on 11 Oct 2018
can you upload the text file?
Harry Green
Harry Green on 11 Oct 2018
I've uploaded the first four lines (out of a couple of million) as an attachment to this comment , and also renamed it as a .txt, although as the function in question is part of a larger pipeline, working with files lots of other people are using, renaming files back and forth is not optimal.
Column 'TEST' is sometimes not included depending on input to genetics software, also other options can input extra columns before the p value column. If a 95% confidence interval is requested, it will add in 2 additional columns between OR and Stat.

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Answers (1)

KSSV
KSSV on 11 Oct 2018
file = 'AssocHead.txt' ;
opts = detectImportOptions(file,'NumHeaderLines',0);
T = readtable(file,opts) ;
  1 Comment
Harry Green
Harry Green on 11 Oct 2018
The reason that readtable is not a possibility here is already addressed in the original question and reiterated in the comment.
The file is not a .txt, I renamed it to a .txt when uploading to make it easier for people to open directly from the browser. readtable does not take files of the desired extension. Why renaming the file is not desirable is addressed in the comment.

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