BrainStat (ALPHA VERSION)

Version 0.4.2 (45.9 MB) by Reinder Vos de Wael
A statistics toolbox for neuroimaging.
0.0
(0)
298 Downloads
Updated 19 Oct 2022
View License on GitHub

BrainStat : A toolbox for statistical analysis of neuroimaging data

https://readthedocs.org/projects/brainstat/badge/?version=master&style=plastic

Welcome to BrainStat's documentation!

BrainStat is a toolbox for the statistical analysis and context decoding of neuroimaging data. It implements both univariate and multivariate linear models and interfaces with the BigBrain Atlas, Allen Human Brain Atlas and Nimare databases. BrainStat flexibly handles common surface, volume, and parcel level data formats, and provides a series of interactive visualization functions. The toolbox has been implemented in both Python and MATLAB, the two most widely adopted programming languages in the neuroimaging and neuroinformatics communities. It is openly available, and documented here.

https://github.com/MICA-LAB/BrainStat/blob/master/docs/figures/brainstat_logo_bw.png?raw=true

Developers

  • Sara Lariviere - MICA Lab, Montreal Neurological Institute
  • Şeyma Bayrak - Max Planck Institute for Human Cognitive and Brain Sciences
  • Reinder Vos de Wael - MICA Lab, Montreal Neurological Institute
  • Oualid Benkarim - MICA Lab, Montreal Neurological Institute
  • Raul Cruces - MICA Lab, Montreal Neurological Institute
  • Jessica Royer - MICA Lab, Montreal Neurological Institute
  • Peer Herholz - Montreal Neurological Institute
  • Seok-Jun Hong - Sungkyunkwan University
  • Sofie Valk - Max Planck Institute for Human Cognitive and Brain Sciences
  • Boris Bernhardt - Montreal Neurological Institute

License

The BrainStat source code is available under the BSD (3-Clause) license.

Support

If you have problems installing the software or questions about usage and documentation, or something else related to BrainStat, you can post to the Issues section of our repository.

MATLAB Release Compatibility
Created with R2022a
Compatible with R2019b and later releases
Platform Compatibility
Windows macOS Linux
Categories
Find more on MRI in Help Center and MATLAB Answers

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!

.github/matlab_toolbox

brainstat_matlab/+brainstat_utils

brainstat_matlab/+brainstat_utils/+validators

brainstat_matlab/context

brainstat_matlab/context/+context_utils

brainstat_matlab/datasets

brainstat_matlab/datasets/+dataset_utils

brainstat_matlab/io

brainstat_matlab/io/+io_utils

brainstat_matlab/io/+io_utils/+cifti_matlab

brainstat_matlab/io/+io_utils/+cifti_matlab/private

brainstat_matlab/io/+io_utils/+freesurfer

brainstat_matlab/io/+io_utils/+nifti_toolbox

brainstat_matlab/io/@xmltree

brainstat_matlab/io/@xmltree/private

brainstat_matlab/mesh

brainstat_matlab/plotting

brainstat_matlab/plotting/@plot_hemispheres

brainstat_matlab/plotting/@plot_hemispheres/private

brainstat_matlab/plotting/volume_viewer/@volume_viewer

brainstat_matlab/plotting/volume_viewer/@volume_viewer/private

brainstat_matlab/stats

brainstat_matlab/stats/@FixedEffect

brainstat_matlab/stats/@MixedEffect

brainstat_matlab/stats/@SLM

brainstat_matlab/tests/@test_datasets

brainstat_matlab/tests/@test_other

brainstat_matlab/tests/@test_precomputed

brainstat_matlab/tests/@test_term_random_overloads

brainstat_matlab/tests/@test_utils

brainstat_matlab/tutorials

brainstat_matlab/widely_useful

brainstat_matlab/tutorials

extra

Version Published Release Notes
0.4.2

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.4.2
0.4.1

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.4.1
0.4.0

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.4.0
0.3.6

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.3.6
0.3.5

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.3.5
0.3.4

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.3.4
0.3.3

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.3.3
0.3.2

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.3.2
0.3.1

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.3.1
0.3.0

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.3.0
0.2.8

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.2.8
0.2.7

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.2.7
0.2.6

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.2.6
0.2.5

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.2.5
0.2.4

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.2.4
0.2.3

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.2.3
0.2.2

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.2.2
0.2.0

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.2.0
0.1.3

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.1.3
0.1.1.0

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.1.1
0.1.0

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.1.0
0.0.4

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.0.4
0.0.3

See release notes for this release on GitHub: https://github.com/MICA-MNI/BrainStat/releases/tag/v0.0.3
0.0.2

To view or report issues in this GitHub add-on, visit the GitHub Repository.
To view or report issues in this GitHub add-on, visit the GitHub Repository.