Getting Started Using the SimBiology Command Line

Use the MATLAB^® command line to programmatically write and save scripts for batch processing, and to automate the model building and analysis workflow.

See the following tutorials to get started.

Modeling and Simulation

• Construct a Simple Model

• Model a Gene-Regulation Pathway

• Simulate the Yeast Heterotrimeric G Protein Cycle

• Simulate Biological Variability of the Yeast G Protein Cycle Using the Wild-Type and Mutant Strains

• Create and Simulate a Model with a Custom Function

• Calculate Sensitivities Using sbiosimulate

Estimation

• Fit One-Compartment Model to Individual PK Profile

• Fit a Two-Compartment Model to PK Profiles of Multiple Individuals

• Estimate Category-Specific PK Parameters for Multiple Individuals

• Estimate a Parameter from the Yeast G Protein Model

• PK/PD Modeling and Simulation to Guide Dosing Strategy for Antibiotics

• Modeling the Population Pharmacokinetics of Phenobarbital in Neonates

Deployment

• Deploy a SimBiology Model