volumetri estimation on 3D binary matrix

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Thanks in advance, I have a 3D binary space derived by a microscopy confocal image. I have to estimate the number of connected object and the volume of each one. The classical 2D function bwboundarties bwarea and regiorprops doesn't work. Any suggestion?

Accepted Answer

Emanuele Gandola
Emanuele Gandola on 22 Feb 2017
Edited: Emanuele Gandola on 22 Feb 2017
Thanks Abel! Probably I don't need these functions because I solved in this way
% Calculation of volume
CC = bwconncomp(F);
N = CC.NumObjects;
S = regionprops(CC, 'Area');
allVolume = [S.Area];
where F is the 3D binary matrix.

More Answers (1)

Abel Babu
Abel Babu on 21 Feb 2017
Hi Emanuele,
Take a look at these functions from the Image Processing Toolbox:
These include functions that let you do filtering, segmenting, and perform other image processing operations on 3D volumetric data.
Abel

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