ReproEstim

Version 1.1.0 (3.79 KB) by Agus Hasan
ReproEstim is used to estimate the time-varying reproduction number of infectious disease.
5.0
(3)
93 Downloads
Updated 10 Aug 2020

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Documentation: https://www.medrxiv.org/content/10.1101/2020.06.28.20142158v1

ReproEstim is based on a discrete-time stochastic augmented SIR model. The time-varying reproduction number is estimated using extended Kalman filter.

Primary inputs:

Data
date | month | active case | removed (recovered+deceased) case

Cite As

Agus Hasan (2024). ReproEstim (https://www.mathworks.com/matlabcentral/fileexchange/79018-reproestim), MATLAB Central File Exchange. Retrieved .

MATLAB Release Compatibility
Created with R2020a
Compatible with any release
Platform Compatibility
Windows macOS Linux

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Version Published Release Notes
1.1.0

Adding plot of data fitting.
1.0.0