xolotl neuron and network simulator

xolotl: a fast and powerful neuron and network simulator
328 Downloads
Updated 17 Nov 2022

xolotl is a free-to-use, fast and intuitive neuron and network simulator for MATLAB.

xolotl is a fast single-compartment and
multi-compartment simulator written in C++ with
a MATLAB interface that you'll actually enjoy using.

Why use xolotl? This is why:

---------------------

xolotl is FAST

xolotl is written in C++, and it's fast. In our testing, it's
more than 3 times faster than NEURON for single
compartment neurons.

-------------------

xolotl is easy to use

Want to set up a Hodgkin-Huxley model, inject current,
integrate it and plot the voltage trace? This is all you need:

```matlab
x = xolotl;
x.add('compartment', 'HH','A', 0.01);
x.HH.add('liu/NaV', 'gbar', 1000);
x.HH.add('liu/Kd', 'gbar', 300);
x.HH.add('Leak', 'gbar', 1);
x.I_ext = .2;
x.plot;
```

----------------

xolotl has documentation

Unlike certain widely used NEURON simulators that
shall remain nameless, xolotl has documentation that actually...
exists.

-----------------------

xolotl is fully programmable

xolotl is designed to be used from within MATLAB. It
gives you the best of both worlds: the high performance
of C++ compiled code with the rich power of all the toolboxes
MATLAB has to offer. You can:

* write functions that pass models as arguments
* optimize parameters of neuron models using the Global Optimization Toolbox
* run simulations in parallel across multiple computers
* have a single script to run the simulation and analyze results

Cite As

Srinivas Gorur Shandilya (2024). xolotl neuron and network simulator (https://github.com/sg-s/xolotl/releases/tag/22.11.17), GitHub. Retrieved .

MATLAB Release Compatibility
Created with R2019b
Compatible with any release
Platform Compatibility
Windows macOS Linux
Categories
Find more on Neural Simulation in Help Center and MATLAB Answers

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!

+xolotl

+xolotl/+examples/+costfunctions

+xolotl/+examples/+networks

+xolotl/+examples/+neurons

+xolotl/+examples/+plotfunctions

+xtools

@xfind

@xfit

@xolotl

@xtest

examples

examples/xgrid

experimental

experimental/proof-of-concept

optimization/+BurstingNeuron

optimization/+HCO

optimization/+twoComp

Version Published Release Notes
22.11.17

See release notes for this release on GitHub: https://github.com/sg-s/xolotl/releases/tag/22.11.17

21.5.9

See release notes for this release on GitHub: https://github.com/sg-s/xolotl/releases/tag/21.5.9

21.3.23

See release notes for this release on GitHub: https://github.com/sg-s/xolotl/releases/tag/21.3.23

21.2.17

See release notes for this release on GitHub: https://github.com/sg-s/xolotl/releases/tag/v21.2.17

21.1.13

See release notes for this release on GitHub: https://github.com/sg-s/xolotl/releases/tag/v21.1.13

20.11.17

See release notes for this release on GitHub: https://github.com/sg-s/xolotl/releases/tag/v20.11.17

20.9.15

See release notes for this release on GitHub: https://github.com/sg-s/xolotl/releases/tag/v20.9.15

20.7.11

20.6.24.0

See release notes for this release on GitHub: https://github.com/sg-s/xolotl/releases/tag/v20.6.24

20.6.15.0

See release notes for this release on GitHub: https://github.com/sg-s/xolotl/releases/tag/v20.6.15

20.5.12.0

See release notes for this release on GitHub: https://github.com/sg-s/xolotl/releases/tag/v20.5.12

20.4.22.0

See release notes for this release on GitHub: https://github.com/sg-s/xolotl/releases/tag/v20.4.22

20.4.2.0

See release notes for this release on GitHub: https://github.com/sg-s/xolotl/releases/tag/v20.4.2

20.3.23.0

See release notes for this release on GitHub: https://github.com/sg-s/xolotl/releases/tag/v20.3.23

20.3.18.0

See release notes for this release on GitHub: https://github.com/sg-s/xolotl/releases/tag/v20.3.18

20.3.12.0

See release notes for this release on GitHub: https://github.com/sg-s/xolotl/releases/tag/v20.3.12

20.3.9.0

See release notes for this release on GitHub: https://github.com/sg-s/xolotl/releases/tag/v20.3.9

20.3.5.0

See release notes for this release on GitHub: https://github.com/sg-s/xolotl/releases/tag/v20.3.5

20.2.26.0

See release notes for this release on GitHub: https://github.com/sg-s/xolotl/releases/tag/v20.2.26

20.2.3.0

See release notes for this release on GitHub: https://github.com/sg-s/xolotl/releases/tag/v20.2.3

To view or report issues in this GitHub add-on, visit the GitHub Repository.
To view or report issues in this GitHub add-on, visit the GitHub Repository.