Experiment Manager Setup for LSTM

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I want to optimize a LSTM network using the Experiment Manager.
The training data XTrain consists of a cell array. Each cell contains a matrix of type double. The classification is stored in YTrain as a categorical array.
I tried to store the TrainingData in an cell array containg XTrain and YTrain.
function [TrainingData, layers, options] = Experiment1_setup3(params)
load('LSTM_dataset.mat', 'XTrain', 'YTrain', 'XTest', 'YTest')
TrainingData = cell(length(YTrain),1);
for i = length(YTrain)
TrainingData{i} = {XTrain{i} YTrain(i)};
end
inputSize = length(Xtrain{1}(:,1));
numHiddenUnits = 100;
numClasses = length(categories(YTrain));
options = trainingOptions('adam', ...
'ExecutionEnvironment',"auto", ...
'GradientThreshold',1, ...
'MaxEpochs', params.maxEpochs, ...
'MiniBatchSize', params.miniBatchSize, ...
'InitialLearnRate', 0.001, ...
'SequenceLength','longest', ...
'Shuffle','never', ...
'Verbose',0);
I got the following error message:
Error(s) occurred while validating the setup function:
Caused by:
Unable to determine if experiment is for classification or regression because setup function returned invalid outputs.
Not enough input arguments.
I want to ask how to prepare the data for the Experiment Manager since all examples I found use images.
Thank you
  1 Comment
Marco Lutz
Marco Lutz on 9 Sep 2021
I found the error. I simply have the change the first line to:
function [XTrain, YTrain, layers, options] = Experiment1_setup3(params)
For optimization of the XTest prediction i had to create a new function following this example https://de.mathworks.com/help/deeplearning/ug/experiment-using-bayesian-optimization.html
I found it untypically difficult for Matlab to find the correct information on this matter.

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Accepted Answer

Jorge Calvo
Jorge Calvo on 10 Sep 2021
Hi Marco,
This example documents the various syntaxes you can use for the experiment setup function: https://www.mathworks.com/help/deeplearning/ref/experimentmanager-app.html#mw_92d8f99c-f283-4bc5-a5d7-7d779c4831f7
It sounds like you discovered the fourth syntax, hopefully without too much pain!
By the way, you may also be interested in this example, since it involves training an LSTM: https://www.mathworks.com/help/deeplearning/ug/exp-mgr-sequence-regression-example.html
Cheers,
Jorge

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