MATLAB Answers

Measure circle radius in multiple images and output data in csv file

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Nick
Nick on 26 Sep 2021 at 1:05
Commented: Nick on 27 Sep 2021 at 3:04
Hi everyone,
I have thousands of images (most image has a single circle, a few have 2-5 circles with different radius). I would like to measure the radius in each image and output their radius value in a csv or txt tile. I am using the imfindcircles function currently, but I am manually measuring each picture and copying the radius to an Excel file. Here is my current code:
rgb = imread('XXX.jpg');
imshow(rgb)
[centers,radii] = imfindcircles(rgb,[10 300],'Sensitivity',0.85);
imshow(rgb)
h = viscircles(centers,radii,'color','b');
Could someone show me how to revise the code to let it automatically read all the images in my folder and output the values in a csv file? Thanks a lot!

Accepted Answer

yanqi liu
yanqi liu on 26 Sep 2021 at 2:58
sir, may be you want to loop the folder and get result to csv file
the follow is the ref code, please modify it
your_folder = 'please update this to your folder';
files = ls(fullfile(your_folder, '*.jpg'));
res = [];
for i = 1 : size(files,1)
filei = fullfile(your_folder, strtrim(files(i,:)));
rgb = imread(filei);
%imshow(rgb)
[centers,radii] = imfindcircles(rgb,[10 300],'Sensitivity',0.85);
%imshow(rgb)
%h = viscircles(centers,radii,'color','b');
res{end+1} = [centers radii(:)];
end
xlswrite('res.csv',res)

More Answers (1)

Image Analyst
Image Analyst on 26 Sep 2021 at 1:37
Nick, it really depends on how hard it is to find your circles. You forgot to attach your image so I can't see it. It could be you can simply threshold, like I do in my Image Segmentation Tutorial where I find circles:
To process a sequence of files, put your code to analyze a single image in a loop as shown in the FAQ:
  1 Comment
Nick
Nick on 27 Sep 2021 at 3:02
Thanks for the attached websites! I will attach a image next time asking a question. Really appreciate it ! I tried yanqi's code and it works for my images!

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