Unable to create covariance matrix from random vector
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Hi,
I'm trying to build a Gaussian Mixture Model using random initializations and compare the results with one using Kmeans initializations. However, I have difficulty creating the initial covariance matrix. I randomly selected 10 data points from my data set of 2500 data points (each "point" is actually an image), and used them as the means. Then I'm trying to create the covariance matrix from each of these random points.
Here's what I have.
% Randomly initialize GMM parameters
rng(1);
rand_index = randperm(2500);
Mu = data(:,rand_index(1:10));
for i = 1 : 10
Sigma(:,:,i) = cov(Mu);
Pxi(:,i) = mvnpdf(data', Mu(:,i)', Sigma(:,:,i));
end
data is a 50x2500 matrix. I keep getting an error because my Sigma is of the wrong size, or it's not positive definite, etc.
For example, the code above gave the error
Error using mvnpdf (line 116)
SIGMA must be a square matrix with size equal to the number of columns in X, or a row vector with length equal to the number of
columns in X.
If I use
Sigma(:,:,i) = cov([Mu(:,i) Mu(:,i)]');
I get the error
Error using mvnpdf (line 129)
SIGMA must be a square, symmetric, positive definite matrix.
How should I create this covariance matrix?
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