How can I use a customized figure-function to show over UIAxes in app designer?

Dear All,

I am using the SeqLogoFig (attached) to convert my sequences to a logo (https://www.mathworks.com/matlabcentral/fileexchange/27124-seqlogofig). I have found that in the file exchange webpage.

I have used this over the GUIDE GUI but now need to use this in the app designer. I use the folowing lines but it shows error. Would you please help me to resolve this issue and make my code line correct?

Many thanks in advance.

MS

sequence = {'IANTRTHTY','ISNPTRHVY','IAVKVNHSY','SSKEDNPKW','VTYKNVPNW','GIYKVVKYW','KAALLIQKY','VAHELAHQW','TAYEKINKW','STYPRPHEY','IAHELAHQW','MTNGFHMTW','KSSLTQHSW','SSKYAPHSW','VMDVQYNKF','HSVLIHEYY','GTHTVSVKY','MVTTVPHVF','HFDLSHGSA','KSDVHLNFY','TTKQQDHFF','VGKIEHSFW','ATHVLPLHW','LANKTPHTW','HVVEQHWEW','SSLRVPSQW','TTKFIVDGW','SSLQKTPVW','MTSGHWQHY','TAKALQAHW','LAKTGVHHY','GTLKGHNGW','KSVTAFFKW','FVKKLEHSW','YTDNLVRVW','QSYVLVKKW','TTHNQSRKW','STDGHLRVW','VFDHPWETV','VYDVRQAYV','HTILTEKNW','AADSAVRLW'}';

SeqLogoFig(app.UIAxes,sequence,'alphabet','aa','cutoff',0.75,'top-n',9);

*Error:

Error using seqlogo (line 109)

Incorrect number of arguments to seqlogo.

Error in SeqLogoFig (line 83)

wm = seqlogo(SEQ, varargin{:}, 'displaylogo', false);

Answer 1

[Pavan Guntha]

Hi Mohammad,

You could look at the following code snippet:

SeqLogoFig(sequence,'AXES_HANDLE',app.UIAxes,'alphabet','aa','cutoff',0.75,'top-n',9);

'SeqLogoFig.m' is one of the several submissions in MATLAB File Exchange on MATLAB Central which is a forum for our product users to interact, exchange information and knowledge, without MathWorks' involvement. Feel free to contact the author of this submission directly for specific questions about the implementation

Hope this helps!

[Mohammad Shahbazy]

Hi Pavan,

Thanks a lot for you reply. I tried this, it can set the figure over the UIAxes but showing in an inverse form! Besides, it prompts a new figure window with axis labels and ticks (both attached). I am just wondering if I could prevent prompting new window and plot it in a normal mode.

I tried to contact the author but still not received any reply.

Best regards,

Mohammad