mohd akmal masud
Image Segmentation for SPECT and PET. Deep Learning Practitioner
MATLAB
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Content Feed
Question
how to convert .mat file to .dcm file?
Dear all, I have the .mat file as attached. Anyone can help me to convert to .dcm file?
4 days ago | 1 answer | 0
1
answerQuestion
how to plot two-column text file of the energy spectra
Dear all, as attached is a two-column text file of the energy spectra. anyone can help me to plot it?
14 days ago | 1 answer | 0
1
answerQuestion
MASK RCNN Error DataSource TABLE CREATED
Dear All, I want to do the MASK RCNN deep learning method for object detection. (All the data set was attached.) But I got err...
1 month ago | 0 answers | 0
0
answersQuestion
error in gason mask rcnn
Dear Sir, I got error when run the code of mask rcnn. the error like below but all the step I was follow correctly. Un...
1 month ago | 1 answer | 0
1
answerQuestion
MASK RCNN Error DataSource
Dear All, I want to do the MASK RCNN deep learning method for object detection. (All the data set was attached.) But I got err...
1 month ago | 0 answers | 0
0
answersQuestion
How to calculate the total voxelvalue?
Dear all, I have the code below. the problem is, I want to calculate the total voxel value in table. Just now what I doing ...
2 months ago | 0 answers | 0
0
answersQuestion
I want to plot graph when alpha =2.8 or 2.9, but the graph not appear.
Dear Sir, I want to plot the graph for alpha=2.8 or 2.9. But the graph not appear. Anyone can help me clc clear all close a...
3 months ago | 1 answer | 0
1
answerSubmitted
Open RT Struct
This is simple code for opening an RT Struct file in Matlab.
3 months ago | 0 downloads |
Question
How to know the data set after augment?
Hello everyone, I was developed the coding for augmented my data for trainning process using 3D U-Net network. But I dont know ...
3 months ago | 0 answers | 0
0
answersQuestion
How to know the data set after augment?
Hello everyone, I was developed the coding for augmented my data for trainning process using 3D U-Net network. But I dont k...
3 months ago | 2 answers | 0
2
answersQuestion
How to Open RT Struct
Hi Everyone, Anyone can help me to open and view the image of my RT Struct file as attached. Thank yo so much.
4 months ago | 1 answer | 0
1
answerQuestion
How to calculate the VoxelValues using regionprops3
Dear all, how to calculate the voxelvalues using regionprops3 after did the segmentation method. Let say my gray image is spe...
4 months ago | 2 answers | 0
2
answersQuestion
how com from the number of neighborhood size of adaptthresh
Hello all, I've tried the neighborhood size as default for adaptthresh as in figure attached. The value 42 I know it come ...
5 months ago | 0 answers | 0
0
answersQuestion
How to transfer all the coordinate binary into my image dicom
Dear all, I was do segmentation in my dicom image. then I got the binary image. then how to transfer all the coordinate binar...
5 months ago | 0 answers | 0
0
answersQuestion
How to put name axes in 3D surf graph
Dear all, How to put name of axes in 3D surf graph? Let say I want to put the name x-axes:Gy, y-axes: mm, z-axes: mm I have ...
5 months ago | 1 answer | 0
1
answerQuestion
How to put filter size for option NeighborhoodSize in adaptthresh function
Dear all, I want to use adaptthresh for volume segmentation as method, But I dont know hoe to put the size of filter for Neighbo...
5 months ago | 1 answer | 0
1
answerQuestion
Volume segmentation using the Fourier surface method
Dear all, anyone know is how to use the Fourier surface method for volume segmentation in SPECT imaging? That method mention ...
5 months ago | 1 answer | 0
1
answerQuestion
Invalid training data. The output size ([128 128 140 2]) of the last layer does not match the response size ([128 128 36 2]).
Dear All, I have develop code for 3D U-Net. But got error when want train. This is my code 3D U-Net. The Data can get thru...
7 months ago | 0 answers | 0
0
answersQuestion
what is different pixel classification layer, dice classification layer and focal loss layer?
Dear all, Anyone know what is different pixel classification layer, dice classification layer and focal loss layer in deep le...
7 months ago | 1 answer | 0
1
answerQuestion
how to calculate IoU for deep learning segmentation
Hello All, I have groundtruth labeling, and prediction (output) labeling using deep learning. May I know how to calculate IoU ...
7 months ago | 1 answer | 0
1
answerSubmitted
calculate the volume of tumor in logical image
To Compute the no. of voxel (==1) in logical/binary .mat file
8 months ago | 1 download |
Question
how to calculate IoU for semantic segmentation
Hello All, I have groundtruthlabeling, and prediction labeling using deep learning. May I know how to calculate IoU for my s...
8 months ago | 1 answer | 0
1
answerQuestion
how to resize image 3D
Dear all, I have .mat file as attached. The dimension is 130x130x74. How to make it to 128x128x72? I was write the command sc...
8 months ago | 1 answer | 0
1
answerQuestion
how to crop images 3D
Dear all, I have 130x130x36 image as attached. How to crop it into 130x130x10 ? I tried this command, but error h = imcrop(i...
8 months ago | 1 answer | 0
1
answerQuestion
how to extract the pixel value of tumor in uint16 .mat from logical .mat?
Hi all, I have data uint16 .mat. then I label it into tumor and background, and save it into logical .mat. Means the backgrou...
8 months ago | 1 answer | 0
1
answerQuestion
How to calculate the volume of tumor in logical image
Hi all if i have logical image .mat as attached, how to calculate the volume of my tumor inside?
8 months ago | 1 answer | 0
1
answerQuestion
How to open Reconstruction Images using OMEGA?
Dear all, I was reconstruction image simulation using OMEGA in Matlab. Then the image can obtained thru this link https://dr...
9 months ago | 0 answers | 0
0
answersQuestion
HOW TO OPEN IMAGE VOXEL MAN AS ATTACHED
HELLO DEAR, Anyone can help me open my image voxel man as link attached.
9 months ago | 0 answers | 0
0
answersQuestion
How to open Image ict and hct file.
Dear all, anyone can help me to open ict and hct file as attached.
9 months ago | 0 answers | 0
0
answersQuestion
PLEASE HELP ME TO OPEN THE IMAGES
Anyone can help me open my image as attached.
9 months ago | 0 answers | 0
0
answers
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